PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN05467.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 275aa    MW: 30724.4 Da    PI: 7.8456
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN05467.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08756154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr N  f eL  +l ++     +K++Ka+iL  +++ +k+L
  KHN05467.1  7 RKTQKADREKLRRDRFNVQFVELGNILDPD----RPKNDKATILGDTIQLLKDL 56
                6788999********************997....79**************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.144656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-11678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-12674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.72E-5761No hitNo description
PfamPF000102.4E-6756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-51262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MDCTAARKTQ KADREKLRRD RFNVQFVELG NILDPDRPKN DKATILGDTI QLLKDLTSEV  60
SKLKDEYATL NEESCELAQE KNELREEKAS LKSDILKLNN QYQQQLRTVS PWTATDHSIM  120
LAPPSYPYPV PMPIPPAPIA MQPYPFYANQ HSAIIPNPCS TFVPYLVPNT LTEQRSTQYM  180
SPPVHPGFRS HVSGKQESRN KSSKESKAEK HEDSNDVTLT PGSSADQDLS SGQRKSSKLS  240
RKESSCTEVS SLDRCSLSCS VQDSSSSSVV HKHKG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0935590.0BT093559.1 Soybean clone JCVI-FLGm-14O3 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001242300.11e-174uncharacterized protein LOC100817000
SwissprotQ9LT237e-78BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0B2PCV20.0A0A0B2PCV2_GLYSO; Transcription factor bHLH121
STRINGGLYMA12G02740.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-65bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]